stacpolly
Software
Operating System
- Debian 7.3 (AMD64)
Compilers
See the section: Compilers.
Queuing system
Torque 2.3.5 is the queuing software. All parallel tasks require submission to the queue. Submission of jobs is done with the qsub command. The queue can be queried with showq or qstat.
See the section: Job Submission.
Tools
CosmoMC
By request, I built CosmoMC with support for Planck Likelihood, compiled with the Intel compiler suite.
To run (assuming you are familiar with cosmomc)
setenv LD_LIBRARY_PATH ${LD_LIBRARY_PATH}:/home/ert/local/Intel/lib ln -s /home/ert/local/share/Planck ./data/clik /home/ert/local/Intel/bin/mpirun -np 2 /home/ert/local/Intel/bin/cosmomc your.ini
Let me know if you have any troubles with cosmomc
Libraries
There are a series of libraries and associated tools that are available pre-compiled with both the GCC and Intel compiler suites.
The GCC-compiled packages have their root in /home/ert/local.
The Intel-compiled packages have their root in /home/ert/local/Intel.
Adjust your paths accordingly.
Package | Version |
---|---|
cfitsio | 3360 |
FFTW | 2.1.5 |
GSL | 1.16 |
HDF5 | 1.8.8 |
lapack | 3.5.0 |
OpenMPI | 1.6.5 |